miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
8864	+	44722	73	20.5	-22.9	NP_061564		5' arm      3' arm
8862	+	43081	90	24	-27.8	NP_061562		5' arm      3' arm
8922	-	43307	89	20	-24.2	NP_061562		5' arm      3' arm
8921	-	43170	90	19	-21.9	NP_061562		5' arm      3' arm
8863	+	43298	87	21.5	-25.2	NP_061562		5' arm      3' arm
8861	+	42716	89	20	-19.6	NP_061561		5' arm      3' arm
8859	+	41976	89	20	-22	NP_061560		5' arm      3' arm
8860	+	42159	85	19.5	-22.3	NP_061560		5' arm      3' arm
8920	-	41295	89	21.5	-25	NP_061559		5' arm      3' arm
8919	-	40576	88	20.5	-20.6	NP_061558		5' arm      3' arm
8858	+	40263	90	22.5	-21	NP_061557		5' arm      3' arm
8918	-	40278	88	20	-19.7	NP_061557		5' arm
8855	+	38329	90	21	-20.2	NP_061552		5' arm      3' arm
8917	-	38418	90	19	-22.9	NP_061552		5' arm      3' arm
8851	+	36505	87	19.5	-24.7	NP_061549		5' arm      3' arm
8854	+	37473	90	20.5	-21.6	NP_061549		5' arm      3' arm
8852	+	36854	90	21.5	-22.6	NP_061549		5' arm      3' arm
8853	+	37366	88	22	-26.4	NP_061549		5' arm      3' arm
8915	-	35769	89	19	-20	NP_061547		3' arm
8914	-	35329	89	20	-21.6	NP_061547		3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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