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| GenBank Identifier | RefSeq Acc. | Name |
| 22788711 | NC_004156.1 | Heliothis zea virus 1 |
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| ID | strand | start position | length | sRNA loop score | core MFE. |
NP ORF
|
Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 16690 | - | 164005 | 90 | 24 | -31.5 | NP_690528 | 5' arm 3' arm | ||
| 16689 | - | 152711 | 85 | 20.5 | -21 | NP_690523 | 5' arm 3' arm | ||
| 16652 | + | 146304 | 89 | 23 | -26.3 | NP_690519 | 5' arm 3' arm | ||
| 16688 | - | 145534 | 89 | 24.5 | -21.4 | NP_690518 | 5' arm 3' arm | ||
| 16651 | + | 143798 | 87 | 19.5 | -21 | NP_690517 | 5' arm 3' arm | ||
| 16685 | - | 140108 | 89 | 21.5 | -23.3 | NP_690516 | 5' arm 3' arm | ||
| 16684 | - | 135420 | 90 | 25.5 | -25.8 | NP_690514 | 5' arm 3' arm | ||
| 16682 | - | 130810 | 88 | 22 | -20.4 | NP_690509 | 5' arm 3' arm | ||
| 16681 | - | 126253 | 90 | 20.5 | -24.54 | NP_690507 | 5' arm 3' arm | ||
| 16650 | + | 123043 | 89 | 24 | -24.7 | NP_690502 | 5' arm 3' arm | ||
| 16649 | + | 122878 | 85 | 29.5 | -27.3 | NP_690502 | 5' arm 3' arm | ||
| 16680 | - | 114050 | 89 | 25 | -24.7 | NP_690495 | 5' arm 3' arm | ||
| 16648 | + | 112029 | 90 | 24.5 | -21.7 | NP_690494 | 5' arm 3' arm | ||
| 16647 | + | 109996 | 86 | 21 | -24 | NP_690494 | 5' arm 3' arm | ||
| 16679 | - | 112589 | 85 | 23.5 | -22.7 | NP_690494 | 5' arm 3' arm | ||
| 16677 | - | 109209 | 87 | 24.5 | -21.9 | NP_690493 | 5' arm 3' arm | ||
| 16678 | - | 109344 | 90 | 20.5 | -23.11 | NP_690493 | 5' arm 3' arm | ||
| 16646 | + | 106958 | 88 | 20 | -24.3 | NP_690491 | 5' arm 3' arm | ||
| 16645 | + | 103109 | 90 | 24 | -21 | NP_690489 | 5' arm 3' arm | ||
| 16644 | + | 101712 | 89 | 21 | -20.2 | NP_690489 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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