miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
16681	-	126253	90	20.5	-24.54	NP_690507		5' arm      3' arm
16682	-	130810	88	22	-20.4	NP_690509		5' arm      3' arm
16688	-	145534	89	24.5	-21.4	NP_690518		5' arm      3' arm
16694	-	178642	90	21	-20.4	NP_690541		5' arm      3' arm
16669	-	58885	87	26.5	-30.7	NP_690462		5' arm      3' arm
16676	-	96293	89	21.5	-22	NP_690486		5' arm      3' arm
16684	-	135420	90	25.5	-25.8	NP_690514		5' arm      3' arm
16696	-	181102	90	22	-22.5	NP_690542		5' arm      3' arm
16678	-	109344	90	20.5	-23.11	NP_690493		5' arm      3' arm
16695	-	180528	87	23	-21.9	NP_690542		5' arm      3' arm
16683	-	133011	87	23.5	-20.8			5' arm      3' arm
16680	-	114050	89	25	-24.7	NP_690495		5' arm      3' arm
16685	-	140108	89	21.5	-23.3	NP_690516		5' arm      3' arm
16686	-	144350	89	21.5	-26.9			5' arm      3' arm
16690	-	164005	90	24	-31.5	NP_690528		5' arm      3' arm
16693	-	174466	89	21	-28	NP_690538		5' arm      3' arm
16665	-	44807	85	22.5	-30.1	NP_690455		5' arm      3' arm
16668	-	57896	88	21	-27.6	NP_690460		5' arm      3' arm
16672	-	76897	89	19.5	-24.4	NP_690474		5' arm      3' arm
16675	-	90349	90	21	-20.53	NP_690481		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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